xmipp3.protocols.protocol_movie_max_shift module

class xmipp3.protocols.protocol_movie_max_shift.XmippProtMovieMaxShift(**args)

Bases: ProtProcessMovies

Protocol to make an automatic rejection of those movies whose frames move more than a given threshold.

Rejection criteria:

• by frame: Rejects movies with drifts between frames

  bigger than a certain maximum.

• by whole movie: Rejects movies with a total travel

  bigger than a certain maximum.

• by frame and movie: Rejects movies if both conditions

  above are met.

• by frame or movie: Rejects movies if one of the conditions

  above are met.

REJ_AND = 2

REJ_FRAME = 0

REJ_MOVIE = 1

REJ_OR = 3

REJ_TYPES = ['by frame', 'by whole movie', 'by frame and movie', 'by frame or movie']

createOutputStep()

getMicFromMovie(movie, isDoseWeighted)

Get the Micrograph/DwMicrograph related with a certain movie

setInputMics()

Setting the self.inputMics to the SetOfMics associated to the input movies (or None if no relation is found). The same for DoseWeighted mics