Graphical interface manuals

The following guides show you how to perform certain actions using the GUI:

Image processing resources

Very complete Youtube list about cryoem image processing videos

Tutorials

These tutorials provides a quick introduction to processing with Scipion.

Single particle tutorials

Tomography tutorials

Model building

Flexibility hub

Flexibility Hub tutorial main page

Processing How To’s

Importing data

Importing Data: Importing data is the first step for any Scipion project. Find out how to import movies, micrographs, CTFs, and particles and which are the formats currently supported.

Creating subsets

Creating subsets: Find out how to create subsets from micrographs, particles, volumes or from 2D/3D classifications. This tool is valid for results from any package.

Threads, mpis and GPUs

Understanding these common execution parameters it is always important but at the same time confusing. We try to explain them here

FAQ

FAQ: Frequently Asked Questions

Relion in Scipion

Relion in Scipion: Check how to use Relion inside Scipion. Some of the original Relion FAQ are addressed.