xmipp3.protocols.protocol_cl2d module

class xmipp3.protocols.protocol_cl2d.XmippProtCL2D(**args)[source]

Bases: ProtClassify2D

Classifies a set of 2D images using clustering algorithms. It subdivides the original dataset into user-defined classes, aiding the identification of particle heterogeneity or structural variations within the data.

analyzeOutOfCores(subset)[source]: Analyze which images are out of cores

convertInputStep(particlesId, classesId)[source]

createOutputStep(subset='')[source]: Store the SetOfClasses2D object resulting from the protocol execution.

evaluateClassesStep(subset='')[source]: Calculate the FRC and output the hierarchy for each level of classes.

sortClassesStep(subset='')[source]: Sort the classes and provided a quality criterion.