xmipp3.protocols.protocol_pick_noise module

class xmipp3.protocols.protocol_pick_noise.XmippProtPickNoise(**args)[source]

Bases: ProtParticlePicking, XmippProtocol

Protocol designed pick noise particles in micrographs and not real particles. The protocol allows you to choose the number of noise particles to extract from each micrograph. Set to -1 for extracting the same amount of noise particles as the number true particles for that micrograph

createOutputStep(outCoordsPosDir)[source]

getInputMicrographs()[source]

getInputMicrographsPointer()[source]

pickNoiseStep(mics_dir, inCoordsPosDir, outCoordsPosDir, boxSize, extractNoiseNumber, nThr)[source]

prepareInput()[source]

xmipp3.protocols.protocol_pick_noise.pickNoise_prepareInput(setOfCoords, outPath, outCoordsPosDir=None)[source]