xmipp3.protocols.protocol_angular_graph_consistency module

class xmipp3.protocols.protocol_angular_graph_consistency.XmippProtAngularGraphConsistency(*args, **kwargs)[source]

Bases: ProtAnalysis3D

Performs soft alignment validation of a set of particles previously aligned confronting them using Graph filtered correlations representation. This protocol produces an histogram with two groups of particles.

calculateAngStep(newXDim, TsCurrent, ResolutionAlignment)[source]

checkInfoField(fnDir, block)[source]

cleanDirectory()[source]

convertInputStep(inputParticlesId)[source]

createOutput()[source]

doIteration000()[source]

globalAssignment()[source]

otsu(ccList)[source]

prepareImages(fnDirPrevious, fnDir, TsCurrent, getShiftsFrom='')[source]

prepareReferences(fnDirPrevious, fnDir, TsCurrent, targetResolution)[source]

readInfoField(fnDir, block, label)[source]

writeInfoField(fnDir, block, label, value)[source]