xmipp3.protocols.protocol_screen_particles module¶
- class xmipp3.protocols.protocol_screen_particles.XmippProtScreenParticles(**kwargs)[source]¶
Bases:
pwem.protocols.protocol_particles.ProtProcessParticles
Attach different merit values to every particle in order to prune the set. zScore evaluates the similarity of a particles with an average (lower zScore -> high similarity). SSNR evaluates the signal/noise ration in the Fourier space. Variance evaluates the varaince on the micrographs context where the particle was picked.
- REJ_MAXZSCORE = 1¶
- REJ_NONE = 0¶
- REJ_PERCENTAGE = 2¶
- REJ_PERCENTAGE_SSNR = 1¶
- REJ_VARGINI = 2¶
- REJ_VARIANCE = 1¶
- SSNR_CHOICES = ['None', 'Percentage']¶
- VAR_CHOICES = ['None', 'Variance', 'Var. and Gini']¶
- ZSCORE_CHOICES = ['None', 'MaxZscore', 'Percentage']¶