relion.protocols.protocol_initialmodel module

class relion.protocols.protocol_initialmodel.ProtRelionInitialModel(**args)

Bases: pwem.protocols.protocol_3d.ProtInitialVolume, relion.protocols.protocol_base.ProtRelionBase

This protocols creates a 3D initial model using Relion.

Generate a 3D initial model _de novo_ from 2D particles using Relion Stochastic Gradient Descent (SGD) algorithm.

CHANGE_LABELS = ['rlnChangesOptimalOrientations', 'rlnChangesOptimalOffsets']

IS_2D = False

IS_3D_INIT = True

IS_CLASSIFY = False

addSymmetry(container)

createOutputStep()