relion.protocols.protocol_ctf_refinement module

class relion.protocols.protocol_ctf_refinement.ProtRelionCtfRefinement(**args)

Bases: pwem.protocols.protocol_particles.ProtParticles, relion.protocols.protocol_base.ProtRelionBase

Wrapper protocol for the Relion’s CTF refinement.

convertInputStep()

Create the input file in STAR format as expected by Relion. If the input particles comes from Relion, just link the file. Params:

particlesId: use this parameters just to force redo of convert if

the input particles are changed.

createGlobalInfo(filename)

createGlobalInfoStep()

createOutputStep()

refineCtfStep()