imod.protocols.protocol_tomoReconstruction module

class imod.protocols.protocol_tomoReconstruction.ProtImodTomoReconstruction(**kwargs)[source]

Bases: pwem.protocols.protocol.EMProtocol, tomo.protocols.protocol_base.ProtTomoBase

Tomogram reconstruction procedure based on the IMOD procedure.

More info:
https://bio3d.colorado.edu/imod/doc/man/tilt.html
closeOutputSetsStep()[source]
computeReconstructionStep(tsObjId)[source]
convertInputStep(tsObjId)[source]
createOutputStep(tsObjId)[source]
static getAngleStepFromSeries(ts)[source]

This method return the average angles step from a series.

getOutputSetOfTomograms()[source]