imod.protocols.protocol_ctfEstimation_manual module¶

class imod.protocols.protocol_ctfEstimation_manual.ProtImodManualCtfEstimation(**args)[source]¶

Bases: imod.protocols.protocol_ctfEstimation_automatic.ProtImodAutomaticCtfEstimation

CTF estimation of a set of input tilt-series using the IMOD procedure. Run the protocol through the interactive GUI. Defocus values are saved to file and exit after autofitting. The program will not ask for confirmation before removing existing entries in the defocus table. If run in interactive mode defocus values MUST BE SAVED manually by the user. More info:

https://bio3d.colorado.edu/imod/doc/man/ctfplotter.html

createOutput()[source]¶

getFilePath(ts, suffix='', extension='')[source]¶

runAllSteps(obj)[source]¶

runCTFEtimationStep()[source]¶