imod.protocols.protocol_ctfEstimation module

class imod.protocols.protocol_ctfEstimation.ProtImodCtfEstimation(**args)[source]

Bases: pwem.protocols.protocol.EMProtocol, tomo.protocols.protocol_base.ProtTomoBase

CTF estimation of a set of input tilt-series using the IMOD procedure. More info:

closeOutputSetsStep()[source]
convertInputStep(tsObjId)[source]
createOutputStep(tsObjId)[source]
ctfEstimation(tsObjId)[source]

Run ctfplotter IMOD program

defocusUTolerance = 20
defocusVTolerance = 20
getExpectedDefocus(tsId)[source]
getOutputSetOfCTFTomoSeries()[source]