cryosparc2.protocols.protocol_cryosparc_homogeneous_refine module

class cryosparc2.protocols.protocol_cryosparc_homogeneous_refine.ProtCryoSparc3DHomogeneousRefine(**kwargs)

Bases: cryosparc2.protocols.protocol_base.ProtCryosparcBase, pwem.protocols.protocol_3d.ProtRefine3D

Protocol to refine a 3D map using cryosparc. Rapidly refine a single homogeneous structure to high-resolution and validate using the gold-standard FSC. Using new faster GPU code, and support for higher-order aberration (beam tilt, spherical aberration, trefoil, tetrafoil) correction and per-particle defocus refinement on the fly.

createOutputStep()

Create the protocol output. Convert cryosparc file to Relion file

doRunRefine()

Returns

ewsParamsName = []

processStep()