relion.viewers.viewer_base module

class relion.viewers.viewer_base.RelionPlotter(x=1, y=1, mainTitle='', **kwargs)

Bases: pwem.viewers.plotter.EmPlotter

Class to create several plots.

plotMd(mdTable, mdLabelX, mdLabelY, color='g', **args)

plot metadata columns mdLabelX and mdLabelY if nbins is in args then and histogram over y data is made

plotMdAngularDistribution(title, angularMd, tableName=None, color='blue')

Create an special type of subplot, representing the angular distribution of weight projections. A metadata should be provided containing labels: RLN_ORIENT_ROT, RLN_ORIENT_TILT

plotMdFile(mdFilename, mdLabelX, mdLabelY, color='g', **args)

plot metadataFile columns mdLabelX and mdLabelY if nbins is in args then and histogram over y data is made

class relion.viewers.viewer_base.RelionViewer(**kwargs)

Bases: pwem.viewers.viewer_base.EmProtocolViewer

Visualization of Relion results.

createDataView(filename, viewParams={})

createScipionPartView(filename)

createScipionView(filename)

relion.viewers.viewer_base.protected_show(showFunc)