bamfordlab.protocols.protocol_ethan_picking module

class bamfordlab.protocols.protocol_ethan_picking.ProtEthanPicker(**kwargs)[source]

Bases: pwem.protocols.protocol_particles_picking.ProtParticlePickingAuto

ETHAN is a program for automatic detection of spherical particles from electron micrographs.

The ETHAN software was written at the Department of Computer Science of University of Helsinki, Finland by Teemu Kivioja.

createOutputStep()[source]
readCoordsFromMics(workingDir, micList, coordSet)[source]

This method should be implemented in subclasses to read the coordinates from a given list of micrographs.

writeConfigFile(configFn)[source]