appion.protocols.protocol_dogpicker module

class appion.protocols.protocol_dogpicker.DogPickerProtPicking(**args)[source]

Bases: pwem.protocols.protocol_particles_picking.ProtParticlePickingAuto

Protocol to pick particles in a set of micrographs using appion dogpicker.

createOutputStep()[source]
getCoordsDir()[source]
readCoordsFromMics(workingDir, micList, coordSet)[source]

This method should be implemented in subclasses to read the coordinates from a given list of micrographs.