Scipion

Set up

  • Installing Scipion v3.0
  • Scipion configuration
  • Host configuration
  • Troubleshooting

User documentation

  • Graphical interface manuals
  • Tutorials
  • Processing How To’s

Facilities

  • Streaming Processing
  • Streaming workflows
  • Tutorial for Facilities

Developer documentation

  • Developers Page

API Documentation

  • Scipion API
  • Plugins API
    • appion package
    • atomstructutils package
    • atsas package
    • bamfordlab package
    • bsoft package
    • ccp4 package
    • chimera package
    • cistem package
    • cryoef package
    • cryosparc2 package
    • deepfinder package
    • dynamo package
    • eman2 package
    • emxlib package
    • fsc3d package
    • gautomatch package
    • gctf package
    • imod package
    • localrec package
    • locscale package
    • motioncorr package
    • novactf package
    • phenix package
    • relion package
    • resmap package
    • sphire package
    • spider package
    • tomo package
    • tomoj package
    • topaz package
    • xmipp2 package
    • xmipp3 package
    • xmipptomo package

Get in touch

  • Contact Us
Scipion
  • Docs »
  • Plugins API
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Plugins API¶

Find below the API documentation for all Scipion plugins

  • appion package
  • atomstructutils package
  • atsas package
  • bamfordlab package
  • bsoft package
  • ccp4 package
  • chimera package
  • cistem package
  • cryoef package
  • cryosparc2 package
  • deepfinder package
  • dynamo package
  • eman2 package
  • emxlib package
  • fsc3d package
  • gautomatch package
  • gctf package
  • imod package
  • localrec package
  • locscale package
  • motioncorr package
  • novactf package
  • phenix package
  • relion package
  • resmap package
  • sphire package
  • spider package
  • tomo package
  • tomoj package
  • topaz package
  • xmipp2 package
  • xmipp3 package
  • xmipptomo package
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