motioncorr.protocols.protocol_motioncorr module

class motioncorr.protocols.protocol_motioncorr.ProtMotionCorr(**kwargs)[source]

Bases: pwem.protocols.protocol_align_movies.ProtAlignMovies

This protocol wraps motioncor2 movie alignment program developed at UCSF.

Motioncor2 performs anisotropic drift correction and dose weighting

(written by Shawn Zheng @ David Agard lab)

calcFrameMotion(movie)[source]
evenOddCapable = True
getInputMovies()[source]
getSamplingRate()[source]
waitForThreadStep()[source]
motioncorr.protocols.protocol_motioncorr.createGlobalAlignmentPlot(meanX, meanY, first, pixSize)[source]

Create a plotter with the shift per frame.