locscale.convert module

locscale.convert.convertBinaryVol(vol, outputDir)

Convert binary volume to a mrc format. Params:

vol: input volume object to be converted. outputDir: where to put the converted file(s)

Return:

new file name of the volume (converted or not).

locscale.convert.getEmanPythonProgram(program)

locscale.convert.getEmanVersion()

Returns a valid eman version installed or an empty string.

locscale.convert.getSupportedEmanVersions()

LocScale needs eman to work.

locscale.convert.getSupportedVersions()

locscale.convert.getVersion()

locscale.convert.validateEmanVersion(errors)

Validate if eman version is set properly according to installed version and the one set in the config file. Params:

protocol: the input protocol calling to validate errors: a list that will be used to add the error message.