emxlib.convert.dataimport module

class emxlib.convert.dataimport.EmxImport(protocol, emxFile, alignType='None')

Bases: object

Import micrographs, coordinates or particles from EMX file.

EMX is a joint initiative for data exchange format between different EM software packages.

importData()

Import micrographs, coordinates and particles from EMX file. If the file contains information about the CTF, it will be also taken into account.

importMicrographs()

importParticles()

loadAcquisitionInfo()

Try to read acquistion from input file.

validate(objectClassName)

Do some validation about the input EMX file. Params:

objectClassName: it could be either (MICROGRAPHS or PARTICLES)

validateMicrographs()

validateParticles()