pwem.viewers.mdviewer.volumeViewer module

class pwem.viewers.mdviewer.volumeViewer.CustomScrollBar[source]

Bases: QScrollBar

Class to custom the scrollbar widget

wheelEvent(event)[source]: Handle the mouse wheel event

class pwem.viewers.mdviewer.volumeViewer.CustomWidget(data, text='', autocontrast=False, gaussianBlurFilter=False)[source]

Bases: QWidget

Class to custom the table cell widget

getData()[source]: Return the content data

getId()[source]: Return the widget id

getValue()[source]: Return the image path

getWidgetContent()[source]: Return the widget content

widgetType()[source]: Return the type of the widget content

class pwem.viewers.mdviewer.volumeViewer.VolumeViewer(filePath)[source]

Bases: QMainWindow

The VolumeViewer show the data as a table

addSlice(sliceData, row, col, index)[source]: This method converts the volume slice to a PIL image and displays it in the table view using a custom widget (CustomWidget)

applyAutocontrast()[source]: Apply autocontrast to images

gaussianBlurFilter()[source]: Apply a gaussian blur filter to the images

getZoom()[source]

loadVolume()[source]: Reads the volume data from the selected file and calls showVolume to display it.

openFile()[source]: This method uses QFileDialog to open a volume file (.stk or .mrc).

resizeEvent(event)[source]: Handle the resize event and trigger a redraw of the volume slices when resizing the window

setZoom(value)[source]

showVolume()[source]: This method sets up the table view based on the volume data

pwem.viewers.mdviewer.volumeViewer.launchViewer(filePath)[source]