pwem.viewers.filehandlers module

This modules contains file handlers to be registered in the scipion file browser

class pwem.viewers.filehandlers.ChimeraHandler[source]

getFileActions(objFile)[source]: Return actions that can be done with this object. Actions will be displayed in the context menu and the first one will be the default when double-click.

class pwem.viewers.filehandlers.ImageFileHandler[source]

getFileActions(objFile)[source]: Return actions that can be done with this object. Actions will be displayed in the context menu and the first one will be the default when double-click.

getFilePreview(objFile)[source]: Return the preview image and description for the specific object.

class pwem.viewers.filehandlers.ImajeJFileHandler[source]

getFileActions(objFile)[source]: Return actions that can be done with this object. Actions will be displayed in the context menu and the first one will be the default when double-click.

class pwem.viewers.filehandlers.MdFileHandler[source]

getFilePreview(objFile)[source]: Return the preview image and description for the specific object.

class pwem.viewers.filehandlers.ParticleFileHandler[source]

class pwem.viewers.filehandlers.StackHandler[source]

class pwem.viewers.filehandlers.VolFileHandler[source]

pwem.viewers.filehandlers.getImageFromPath(imagePath)[source]: Read an image using Xmipp, convert to PIL and then return as expected by Tk.

pwem.viewers.filehandlers.getPILImage(imageXmipp, dim=None, normalize=True)[source]: Given an image read by Xmipp, convert it to PIL.

pwem.viewers.filehandlers.getTkImage(imageXmipp, filename, dim)[source]