- class cistem.protocols.program_ctffind.ProgramCtffind(protocol)[source]¶
Wrapper of Ctffind4 program that will handle parameters definition and also execution of the program with the proper arguments. This class is not a Protocol, but somewhat related, since it can be used from protocols that perform CTF estimation.
kwargs – The input keywords argument should contain key-values
for one micrograph or group of micrographs. :return: the program and arguments to be run
Retrieve defocus U, V and angle from the output file of the program execution. :param filename: input file to parse :return: a tuple of CTF values