reliontomo.protocols.protocol_refine_3d_tomo module¶

This module contains the protocol for 3d refinement with Relion.

class reliontomo.protocols.protocol_refine_3d_tomo.ProtRelionSubtomoRefine3D(**args)[source]¶

Bases: pwem.protocols.protocol_3d.ProtRefine3D, reliontomo.protocols.protocol_base_tomo.ProtRelionBaseTomo, tomo.protocols.protocol_base.ProtTomoBase

Protocol to refine a 3D map using Relion. Relion employs an empirical Bayesian approach to refinement of (multiple) 3D reconstructions or 2D class averages in electron cryo-microscopy (cryo-EM). Many parameters of a statistical model are learned from the data,which leads to objective and high-quality results.

IS_CLASSIFY = False¶

PREFIXES = ['half1_', 'half2_']¶

createOutputStep()[source]¶