emfacilities package

Subpackages

• emfacilities.protocols package
  • Submodules
    • emfacilities.protocols.getnifs module
    • emfacilities.protocols.protocol_monitor module
    • emfacilities.protocols.protocol_monitor_2d_streamer module
    • emfacilities.protocols.protocol_monitor_ctf module
    • emfacilities.protocols.protocol_monitor_movie_gain module
    • emfacilities.protocols.protocol_monitor_summary module
    • emfacilities.protocols.protocol_monitor_system module
    • emfacilities.protocols.pynvml module
    • emfacilities.protocols.report_html module
    • emfacilities.protocols.report_influx module
    • emfacilities.protocols.summary_provider module
    • emfacilities.protocols.transport module
  • Module contents
• emfacilities.viewers package
  • Submodules
    • emfacilities.viewers.viewer_monitors module
  • Module contents

Submodules

• emfacilities.bibtex module
• emfacilities.constants module

Module contents

This modules contains classes useful for cryo-EM facilities

class emfacilities.Plugin

Bases: pwem.Plugin

classmethod defineBinaries(env)

Define required binaries in the given Environment.

classmethod getEnviron()

Setup the environment variables needed to launch programs.