emfacilities.protocols.protocol_monitor module

class emfacilities.protocols.protocol_monitor.EmailNotifier(smtpServer, emailFrom, emailTo)

Bases: object

notify(title, message)

class emfacilities.protocols.protocol_monitor.Monitor(**kwargs)

Bases: object

addNotifier(notifier)

info(message)

initLoop()

To be defined in subclasses.

loop()

notify(title, message)

step()

To be defined in subclasses.

class emfacilities.protocols.protocol_monitor.PrintNotifier

Bases: object

notify(title, message)

class emfacilities.protocols.protocol_monitor.ProtMonitor(**kwargs)

Bases: pwem.protocols.protocol.EMProtocol

This is the base class for implementing ‘Monitors’, a special type of protocols intended to be used in the context of the Scipion-Box, where several protocols will be run in streaming and the monitor will be ‘observing’ their progress.

createEmailNotifier()

getInputProtocols()

monitorStep()

sendEMail(emailSubject, emailMessage)

classmethod worksInStreaming()