Scipion

Set up

  • Installing Scipion
  • Scipion configuration
  • Host configuration
  • Troubleshooting

User documentation

  • Graphical interface manuals
  • Image processing resources
  • Tutorials
  • Processing How To’s

Facilities

  • On-the-fly processing
  • Streaming workflows
  • Summary Reports

Developer documentation

  • Developers Page

API Documentation

  • Scipion API
  • Plugins API
  • Xmipp API

Get in touch

  • Contact Us

Licences

  • Licenses
Scipion
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  • Tutorials for developers
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Tutorials for developers

  • Introduction to the template plugin

  • Creating a basic calculator plugin from scipion-em-template

  • Protocols and Viewers

  • Creating tests for the calculator plugin

  • Working with sets of images

  • Creating a streaming protocol

  • Understanding the plugin class

  • Creating a monitor

  • Creating a workflow template

  • Customize the HTML report

  • Debugging Scipion with PyCharm


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