reliontomo.protocols.protocol_refine_subtomograms module

class reliontomo.protocols.protocol_refine_subtomograms.ProtRelionRefineSubtomograms(**args)[source]

Bases: reliontomo.protocols.protocol_base_refine.ProtRelionRefineBase, tomo.protocols.protocol_base.ProtTomoBase

Auto-refinement of subtomograms.

FILE_KEYS = ['data', 'optimiser', 'sampling']
PREFIXES = ['half1_', 'half2_']
createOutputStep()[source]
class reliontomo.protocols.protocol_refine_subtomograms.outputObjects(value)[source]

Bases: enum.Enum

An enumeration.

outputAverage = <class 'tomo.objects.AverageSubTomogram'>
outputFSC = <class 'pwem.objects.data.FSC'>
outputRelionParticles = <class 'reliontomo.objects.relionTomoMetadata'>
outputVolumes = <class 'reliontomo.objects.SetOfPseudoSubtomograms'>