reliontomo.protocols.protocol_reconstruct_subtomo module

class reliontomo.protocols.protocol_reconstruct_subtomo.ProtRelionSubTomoReconstruct(**kwargs)

Bases: pwem.protocols.protocol_3d.ProtReconstruct3D

This protocol reconstructs a volume using Relion.

Reconstruct a volume from a given set of particles. The alignment parameters will be converted to a Relion star file and used as direction projections to reconstruct.

convertInputStep()

Create the input file in STAR format as expected by Relion.

createOutputStep()

inStarName = 'input_particles'

outTomoName = 'output_volume'

reconstructStep(params)