reliontomo.convert.convert30_tomo module

class reliontomo.convert.convert30_tomo.Reader(starFile, dataTable, **kwargs)[source]

Bases: reliontomo.convert.convertBase.ReaderTomo

static gen3dCoordFromStarRow(row, precedentDict, scaleFactor=1)[source]
starFile2Coords3D(coordsSet, precedentsSet, scaleFactor)[source]
starFile2SubtomogramsImport(subtomoSet, coordSet, linkedSubtomosDir, starFilePath)[source]
class reliontomo.convert.convert30_tomo.Writer(**kwargs)[source]

Bases: reliontomo.convert.convertBase.WriterTomo

Helper class to convert from Scipion SetOfImages subclasses with star file format previous to Relion>3.1, but providing the same

interface as the new Writer class.

subtomograms2Star(subtomoSet, subtomosStar)[source]