eman2.protocols.protocol_initialmodel_sgd module¶

class eman2.protocols.protocol_initialmodel_sgd.EmanProtInitModelSGD(**kwargs)[source]¶

Bases: ProtInitialVolume

This protocol wraps e2initialmodel_sgd.py EMAN2 program.

This program makes initial models using a (kind of) stochastic gradient descent approach. It is recommended that the box size of particles is around 100.

createInitialModelStep(args)[source]¶: Run the EMAN program to create the initial model.

createOutputStep()[source]¶

createStackImgsStep()[source]¶