continuousflex.protocols.protocol_nma_choose module

class continuousflex.protocols.protocol_nma_choose.FlexrotNMAChoose(**args)[source]

Bases: continuousflex.protocols.pdb.protocol_pseudoatoms_base.FlexProtConvertToPseudoAtomsBase, continuousflex.protocols.protocol_nma_base.FlexProtNMABase

Protocol for choosing a volume to construct an NMA analysis

computeNMAStep(fnIn, prefix)[source]
convertToPseudoAtomsStep(inputStructure, fnIn, fnMask, prefix)[source]
evaluateDeformationsStep()[source]