continuousflex.protocols.pdb.protocol_pseudoatoms_base module

class continuousflex.protocols.pdb.protocol_pseudoatoms_base.FlexProtConvertToPseudoAtomsBase(**kwargs)[source]

Bases: pwem.protocols.protocol_3d.Prot3D

convertToPseudoAtomsStep(inputFn, fnMask, sampling, prefix='')[source]
createChimeraScript(volume, pdb)[source]

Create a chimera script to visualize a pseudoatoms pdb obteined from a given EM 3d volume. A property will be set in the pdb object to store the location of the script.