cistem.convert.dataimport module

class cistem.convert.dataimport.GrigorieffLabImportCTF(protocol)

Bases: object

Import CTF estimated with CTFFIND4.

importCTF(mic, fileName)

Create a CTF model and populate its values. :param mic: input micrograph object :param fileName: input file to be parsed :return: CTFModel object

class cistem.convert.dataimport.GrigorieffLabImportParticles(protocol, parFile, stackFile)

Bases: object

Import particles from a Frealign refinement. :param parFile: the filename of the parameter file with the alignment :param stackFile: single stack file with the images

importParticles()

validateParticles()

Overwrite the base class.