# **************************************************************************
# *
# * Authors: Grigory Sharov (gsharov@mrc-lmb.cam.ac.uk)
# *
# * MRC Laboratory of Molecular Biology (MRC-LMB)
# *
# * This program is free software; you can redistribute it and/or modify
# * it under the terms of the GNU General Public License as published by
# * the Free Software Foundation; either version 3 of the License, or
# * (at your option) any later version.
# *
# * This program is distributed in the hope that it will be useful,
# * but WITHOUT ANY WARRANTY; without even the implied warranty of
# * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
# * GNU General Public License for more details.
# *
# * You should have received a copy of the GNU General Public License
# * along with this program; if not, write to the Free Software
# * Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA
# * 02111-1307 USA
# *
# * All comments concerning this program package may be sent to the
# * e-mail address 'scipion@cnb.csic.es'
# *
# **************************************************************************
from pwem.constants import UNIT_ANGSTROM
from pwem.wizards import ParticleMaskRadiusWizard
from .protocols import ProtCryoEF
[docs]class cryoEFMaskDiameterWizard(ParticleMaskRadiusWizard):
_targets = [(ProtCryoEF, ['diam'])]
_unit = UNIT_ANGSTROM
def _getParameters(self, protocol):
label, value = self._getInputProtocol(self._targets, protocol)
protParams = dict()
protParams['input'] = self._getProtocolImages(protocol)
protParams['label'] = label
protParams['value'] = value / 2
return protParams
def _getProvider(self, protocol):
_objs = self._getParameters(protocol)['input']
return ParticleMaskRadiusWizard._getListProvider(self, _objs)
[docs] def show(self, form, *args):
params = self._getParameters(form.protocol)
_value = params['value']
_label = params['label']
ParticleMaskRadiusWizard.show(self, form, _value, _label, units=self._unit)
[docs] def setVar(self, form, label, value):
# adjust again from radius to diameter
form.setVar(label, value * 2)
def _getProtocolImages(self, protocol):
return protocol.inputParticles