Scipion commands

Table of Contents

• Scipion commands

  • Configuration commands

    • Cleaning projects

      • List outdated projects

      • Delete outdated projects

    • Dealing with projects settings

      • Setting lifeTime

      • Setting readOnly

      • Both

Configuration commands

Cleaning projects

In Scipion and Scipion Web, many projects can be created. Each project has a lifetime, and after that lifetime the project is suitable for deletion.

List outdated projects

To get the list of outdated projects you can run:

scipion run python scripts/clean_projects.py [USER DATA FOLDER]

[USER DATA FOLDER] : by default will be ‘os.environ[‘SCIPION_USER_DATA’]’ ; otherwise, it must be a folder with some user data.

This will only the projects that are out of date.

Delete outdated projects

To delete outdated projects, you can run:

scipion run python scripts/clean_projects.py [USER DATA FOLDER] --delete

All outdated projects will be deleted.

NOTE: Deleting a project is basically deleting a project folder.

Dealing with projects settings

You can list some project attributes with:

scipion --config [SCIPION CONFIG FILE] run python scripts/config_project.py [PROJECT NAME]

Setting lifeTime

You can also make a project eternal:

scipion --config [SCIPION CONFIG FILE] run python scripts/config_project.py [PROJECT NAME] lifeTime=None

Setting readOnly

You can also make a project read-only:

scipion --config [SCIPION CONFIG FILE] run python scripts/config_project.py [PROJECT NAME] readOnly=True

Both

Both at the same time:

scipion --config [SCIPION CONFIG FILE] run python scripts/config_project.py [PROJECT NAME] readOnly=True  lifeTime=None