pwem.objects.data_tiltpairs module

This modules contains data classes related to Random Conical Tilt workflow.

class pwem.objects.data_tiltpairs.Angles(**args)[source]

Bases: EMObject

Represents a triplet of angles

getAngles()[source]

setAngles(angleY, angleY2, angleTilt)[source]

class pwem.objects.data_tiltpairs.CoordinatesTiltPair(**kwargs)[source]

Bases: TiltPairSet

Represents a Coordinates Tilt Pair

ITEM_TYPE: alias of TiltPair

close()[source]

getAngles()[source]

getBoxSize()[source]

getFiles()[source]: Get all filePaths

getMicsPair()[source]

setAngles(setAngles)[source]

setMicsPair(micsPair)[source]

class pwem.objects.data_tiltpairs.MicrographsTiltPair(**kwargs)[source]

Bases: TiltPairSet

Represents a Micrographs Tilt Pair

ITEM_TYPE: alias of TiltPair

class pwem.objects.data_tiltpairs.ParticlesTiltPair(**kwargs)[source]

Bases: TiltPairSet

Represents a Particles Tilt Pair

ITEM_TYPE: alias of TiltPair

getCoordsPair()[source]

getFiles()[source]: Get all filePaths

setCoordsPair(coordsPair)[source]

class pwem.objects.data_tiltpairs.SetOfAngles(filename=None, prefix='', mapperClass=None, classesDict=None, **kwargs)[source]

Bases: EMSet

Represents a set of Images

ITEM_TYPE: alias of Angles

class pwem.objects.data_tiltpairs.TiltPair(untilted=None, tilted=None, **kwargs)[source]

Bases: EMObject

getTilted()[source]

getUntilted()[source]

setTilted(tilted)[source]

setUntilted(untilted)[source]

class pwem.objects.data_tiltpairs.TiltPairSet(**kwargs)[source]

Bases: EMSet

Base class for Tilt pairs sets.

ITEM_TYPE = None

close()[source]

getFiles()[source]: Get all filePaths

getTilted()[source]

getUntilted()[source]

setTilted(tilted)[source]

setUntilted(untilted)[source]

write(properties=True)[source]

Commit the changes made to the Set underlying database.

Parameters: properties – this flag controls when to write Set attributes to special table ‘Properties’ in the database. False value is use for example in SetOfClasses for not writing each Class2D properties.