relion.protocols.protocol_reconstruct module

class relion.protocols.protocol_reconstruct.ProtRelionReconstruct(**kwargs)

Bases: pwem.protocols.protocol_3d.ProtReconstruct3D

This protocol reconstructs a volume using Relion.

Reconstruct a volume from a given set of particles. The alignment parameters will be converted to a Relion star file and used as direction projections to reconstruct.

convertInputStep()

Create the input file in STAR format as expected by Relion. If the input particles comes from Relion, just link the file.

createOutputStep()

reconstructStep(params)