Source code for xmipptomo.wizards

# -*- coding: utf-8 -*-
# **************************************************************************
# *
# * Authors:     Estrella Fernandez Gimenez (me.fernandez@cnb.csic.es)
# *
# * [1] Unidad de Bioinformatica of Centro Nacional de Biotecnologia , CSIC
# *
# * This program is free software; you can redistribute it and/or modify
# * it under the terms of the GNU General Public License as published by
# * the Free Software Foundation; either version 2 of the License, or
# * (at your option) any later version.
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# * This program is distributed in the hope that it will be useful,
# * but WITHOUT ANY WARRANTY; without even the implied warranty of
# * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
# * GNU General Public License for more details.
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# * You should have received a copy of the GNU General Public License
# * along with this program; if not, write to the Free Software
# * Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA
# * 02111-1307  USA
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# *  All comments concerning this program package may be sent to the
# *  e-mail address 'scipion@cnb.csic.es'
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# **************************************************************************

from pyworkflow.wizard import Wizard
from .protocols import XmippProtConnectedComponents


[docs]class XmippConnectedCompWizard(Wizard): _targets = ([(XmippProtConnectedComponents, ['distance'])])
[docs] def show(self, form): tomoCCProt = form.protocol inputCoordinates = tomoCCProt.inputCoordinates.get() if not inputCoordinates: print('You must specify input coordinates') return boxSize = inputCoordinates.getBoxSize() if not boxSize: print('These coordinates do not have box size. Please, enter distance manually.') return distance = boxSize * 3 form.setVar('distance', distance)