xmipp3.protocols.protocol_cl2d module

class xmipp3.protocols.protocol_cl2d.XmippProtCL2D(**args)[source]

Bases: pwem.protocols.protocol_2d.ProtClassify2D

Classifies a set of images using a clustering algorithm to subdivide the original dataset into a given number of classes.

analyzeOutOfCores(subset)[source]

Analyze which images are out of cores

convertInputStep(particlesId, classesId)[source]
createOutputStep(subset='')[source]

Store the SetOfClasses2D object resulting from the protocol execution.

evaluateClassesStep(subset='')[source]

Calculate the FRC and output the hierarchy for each level of classes.

sortClassesStep(subset='')[source]

Sort the classes and provided a quality criterion.