continuousflex.protocols package
================================

Subpackages
-----------

.. toctree::
   :maxdepth: 4

   continuousflex.protocols.pdb
   continuousflex.protocols.utilities

Submodules
----------

.. toctree::
   :maxdepth: 4

   continuousflex.protocols.convert
   continuousflex.protocols.data
   continuousflex.protocols.protocol_apply_volumeset_alignment
   continuousflex.protocols.protocol_batch_cluster
   continuousflex.protocols.protocol_batch_cluster_heteroflow
   continuousflex.protocols.protocol_batch_cluster_vol
   continuousflex.protocols.protocol_denoise_volumes
   continuousflex.protocols.protocol_genesis
   continuousflex.protocols.protocol_heteroflow
   continuousflex.protocols.protocol_heteroflow_dimred
   continuousflex.protocols.protocol_histogram_matching
   continuousflex.protocols.protocol_image_synthesize
   continuousflex.protocols.protocol_missing_wedge_filling
   continuousflex.protocols.protocol_nma
   continuousflex.protocols.protocol_nma_alignment
   continuousflex.protocols.protocol_nma_alignment_vol
   continuousflex.protocols.protocol_nma_base
   continuousflex.protocols.protocol_nma_choose
   continuousflex.protocols.protocol_nma_dimred
   continuousflex.protocols.protocol_nma_dimred_vol
   continuousflex.protocols.protocol_pdb_dimred
   continuousflex.protocols.protocol_structure_mapping
   continuousflex.protocols.protocol_subtomogram_averaging
   continuousflex.protocols.protocol_subtomogram_refine_alignment
   continuousflex.protocols.protocol_subtomograms_classify
   continuousflex.protocols.protocol_subtomogrmas_synthesize

Module contents
---------------

.. automodule:: continuousflex.protocols
   :members:
   :undoc-members:
   :show-inheritance: