pwem.wizards.wizards_3d.mask_structure_wizard module¶

class pwem.wizards.wizards_3d.mask_structure_wizard.MaskStructureWizard(filename)[source]¶

Bases: object

Create a mask for an atomic structure interactively. Masks currently implemented: - Spherical mask

change_view(event)[source]¶

downsamplingPC(voxel_size)[source]¶

get_sphere_params()[source]¶

initializePlot()[source]¶

is_window_closed()[source]¶

on_release(event)[source]¶

plotScatter()[source]¶

plot_sphere(radius)[source]¶

press_shift(event)[source]¶

release_shift(event)[source]¶

set_axes_equal(ax: matplotlib.axes._axes.Axes)[source]¶

Set 3D plot axes to equal scale.

Make axes of 3D plot have equal scale so that spheres appear as spheres and cubes as cubes. Required since ax.axis(‘equal’) and ax.set_aspect(‘equal’) don’t work on 3D.