deepfinder.objects module

class deepfinder.objects.Coordinate3DWithScore(**kwargs)

Bases: tomo.objects.Coordinate3D

Extension of Coordinate3D adding a score attribute. Useful for automatic particle picking, where algorithms may attribute scores to hits.

getScore()

setScore(x)

class deepfinder.objects.DeepFinderNet(path=None, **kwargs)

Bases: pwem.objects.data.EMObject

Simple class to store the neural network model for DeepFinder.

getNbOfClasses()

getPath()

setNbOfClasses(nclass)

setPath(path)

class deepfinder.objects.SetOfCoordinates3DWithScore(**kwargs)

Bases: tomo.objects.SetOfCoordinates3D

Encapsulate the logic of a set of Coordinate3DWithScore.

ITEM_TYPE

alias of Coordinate3DWithScore