pkpd.objects module¶
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class
pkpd.objects.
PKDepositionParameters
(**args)[source]¶ Bases:
pkpd.inhalation.PKDepositionParameters
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class
pkpd.objects.
PKPDAllometricScale
(**args)[source]¶ Bases:
pwem.objects.data.EMObject
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READING_MODELS
= 2¶
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READING_PREDICTOR
= 1¶
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READING_X
= 3¶
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READING_Y
= 4¶
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class
pkpd.objects.
PKPDDEOptimizer
(model, fitType, goalFunction='RMSE')[source]¶ Bases:
pkpd.objects.PKPDOptimizer
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class
pkpd.objects.
PKPDDataSet
(name, folder, files, url=None)[source]¶ Bases:
object
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class
pkpd.objects.
PKPDDoseResponse
(**args)[source]¶ Bases:
pwem.objects.data.EMObject
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class
pkpd.objects.
PKPDExperiment
(**args)[source]¶ Bases:
pwem.objects.data.EMObject
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READING_A_MEASUREMENT
= 8¶
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READING_DOSES
= 4¶
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READING_GENERAL
= 1¶
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READING_GROUPS
= 5¶
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READING_MEASUREMENTS
= 7¶
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READING_SAMPLES
= 6¶
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READING_VARIABLES
= 2¶
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READING_VIAS
= 3¶
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class
pkpd.objects.
PKPDFitting
(cls='', **args)[source]¶ Bases:
pwem.objects.data.EMObject
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READING_FITTING_EXPERIMENT
= 1¶
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READING_FITTING_MODEL
= 5¶
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READING_FITTING_PREDICTED
= 3¶
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READING_FITTING_PREDICTED_LIST
= 4¶
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READING_FITTING_PREDICTOR
= 2¶
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READING_POPULATION
= 7¶
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READING_POPULATION_HEADER
= 6¶
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READING_SAMPLEFITTINGS_BEGIN
= 8¶
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READING_SAMPLEFITTINGS_CONTINUE
= 9¶
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class
pkpd.objects.
PKPDLSOptimizer
(model, fitType, goalFunction='RMSE')[source]¶ Bases:
pkpd.objects.PKPDOptimizer
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class
pkpd.objects.
PKPDModel
[source]¶ Bases:
pkpd.objects.PKPDModelBase2
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class
pkpd.objects.
PKPDModelBase2
[source]¶ Bases:
pkpd.objects.PKPDModelBase
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class
pkpd.objects.
PKPDODEModel
[source]¶ Bases:
pkpd.objects.PKPDModelBase2
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class
pkpd.objects.
PKPDSampleFit
[source]¶ Bases:
object
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READING_SAMPLEFITTINGS_AIC
= 4¶
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READING_SAMPLEFITTINGS_AICc
= 5¶
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READING_SAMPLEFITTINGS_BIC
= 6¶
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READING_SAMPLEFITTINGS_MODELEQ
= 1¶
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READING_SAMPLEFITTINGS_NAME
= 0¶
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READING_SAMPLEFITTINGS_PARAMETER_BOUNDS
= 7¶
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READING_SAMPLEFITTINGS_R2
= 2¶
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READING_SAMPLEFITTINGS_R2ADJ
= 3¶
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READING_SAMPLEFITTINGS_SAMPLE_VALUES
= 8¶
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class
pkpd.objects.
PKPDSampleFitBootstrap
[source]¶ Bases:
object
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READING_SAMPLEFITTINGS_NAME
= 0¶
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READING_SAMPLEFITTINGS_PARAMETERS
= 3¶
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READING_SAMPLEFITTINGS_XB
= 1¶
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READING_SAMPLEFITTINGS_YB
= 2¶
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class
pkpd.objects.
PKPDSignalAnalysis
(**args)[source]¶ Bases:
pwem.objects.data.EMObject
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READING_ANALYSIS_VARIABLES
= 5¶
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READING_EXPERIMENT
= 1¶
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READING_MODEL
= 4¶
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READING_POPULATION
= 7¶
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READING_POPULATION_HEADER
= 6¶
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READING_PREDICTED
= 3¶
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READING_PREDICTOR
= 2¶
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READING_SAMPLEANALYSIS_NAME
= 8¶
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READING_SAMPLEANALYSIS_PARAMETERS
= 9¶
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class
pkpd.objects.
PKPDVariable
[source]¶ Bases:
object
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ROLE_LABEL
= 1012¶
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ROLE_MEASUREMENT
= 1011¶
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ROLE_NAMES
= {1010: 'time', 1011: 'measurement', 1012: 'label'}¶
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ROLE_TIME
= 1010¶
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TYPE_NAMES
= {1000: 'numeric', 1001: 'text'}¶
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TYPE_NUMERIC
= 1000¶
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TYPE_TEXT
= 1001¶
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class
pkpd.objects.
PKPhysiologyLungParameters
(**args)[source]¶ Bases:
pkpd.inhalation.PKPhysiologyLungParameters