jjsoft.protocols.protocol_reconstruct_tomogram module

class jjsoft.protocols.protocol_reconstruct_tomogram.ProtJjsoftReconstructTomogram(**args)[source]

Bases: pwem.protocols.protocol.EMProtocol, tomo.protocols.protocol_base.ProtTomoBase

Reconstruct tomograms from aligned tilt series using TOMO3D from Software from: https://sites.google.com/site/3demimageprocessing/ Returns the set of tomograms

convertInputStep()[source]
createOutputStep()[source]
get_Ts_files(ts_folder, TsId)[source]

Returns the path of the Tilt Serie and the angles files

reconstructTomogramStep(tsId, workingFolder)[source]