deepfinder.objects module

class deepfinder.objects.Coordinate3DWithScore(**kwargs)[source]

Bases: tomo.objects.Coordinate3D

Extension of Coordinate3D adding a score attribute. Useful for automatic particle picking, where algorithms may attribute scores to hits.

getScore()[source]
setScore(x)[source]
class deepfinder.objects.DeepFinderNet(path=None, **kwargs)[source]

Bases: pwem.objects.data.EMObject

Simple class to store the neural network model for DeepFinder.

getNbOfClasses()[source]
getPath()[source]
setNbOfClasses(nclass)[source]
setPath(path)[source]
class deepfinder.objects.SetOfCoordinates3DWithScore(**kwargs)[source]

Bases: tomo.objects.SetOfCoordinates3D

Encapsulate the logic of a set of Coordinate3DWithScore.

ITEM_TYPE

alias of Coordinate3DWithScore