xmipp3.viewers.plotter module

This module implement the classes to create plots on xmipp.

class xmipp3.viewers.plotter.XmippPlotter(x=1, y=1, mainTitle='', **kwargs)[source]

Bases: pwem.viewers.plotter.EmPlotter

Class to create several plots with Xmipp utilities

plotMd(md, mdLabelX, mdLabelY, color='g', **args)[source]

plot metadata columns mdLabelX and mdLabelY if nbins is in args then and histogram over y data is made

plotMdAngularDistribution(title, md, color='blue')[source]

Create an special type of subplot, representing the angular distribution of weight projections. A metadata should be provided containing labels: MDL_ANGLE_ROT, MDL_ANGLE_TILT, MDL_WEIGHT

plotMdFile(mdFilename, mdLabelX, mdLabelY, color='g', **args)[source]

plot metadataFile columns mdLabelX and mdLabelY if nbins is in args then and histogram over y data is made

plotScatterMd(md, mdLabelX, mdLabelY, color='g', **args)[source]

scatterplot metadata columns mdLabelX and mdLabelY if nbins is in args then and histogram over y data is made