xmipp3.protocols.protocol_structure_map_sph module

class xmipp3.protocols.protocol_structure_map_sph.XmippProtStructureMapSPH(**kwargs)[source]

Bases: pwem.protocols.protocol_3d.ProtAnalysis3D

Protocol for structure mapping based on spherical harmonics.

convertStep(volFn, volDim, volSr, minDim, maxSr)[source]
deformStep(inputVolFn, refVolFn, i, j)[source]
gatherResultsStep(volList)[source]
xmipp3.protocols.protocol_structure_map_sph.mds(d, dimensions=2)[source]

Multidimensional Scaling - Given a matrix of interpoint distances, find a set of low dimensional points that have similar interpoint distances.