xmipp3.protocols.protocol_multireference_alignability module

class xmipp3.protocols.protocol_multireference_alignability.XmippProtMultiRefAlignability(*args, **kwargs)[source]

Bases: pwem.protocols.protocol_3d.ProtAnalysis3D

Performs soft alignment validation of a set of particles confronting them against a given 3DEM map. This protocol produces particle alignment precision and accuracy parameters.

alignabilityStep(volName, volDir, sym)[source]
angularAccuracyStep(volName, volDir, indx)[source]
convertInputStep(particlesId)[source]

Write the input images as a Xmipp metadata file. particlesId: is only need to detect changes in input particles and cause restart from here.

createOutputStep()[source]
createPlot2D(volPrefix, md)[source]
neighbourhoodDirectionStep(volName, volDir, sym)[source]
phantomProject()[source]
projectionLibraryStep(volName, volDir, angularSampling)[source]
significantStep(volName, volDir, anglesPath, params)[source]