tomo.protocols.protocol_base module

class tomo.protocols.protocol_base.ProtTomoBase[source]

Bases: object

class tomo.protocols.protocol_base.ProtTomoImportAcquisition[source]

Bases: object

FROM_FILE_IMPORT = 1
MANUAL_IMPORT = 0
class tomo.protocols.protocol_base.ProtTomoImportFiles(**kwargs)[source]

Bases: pwem.protocols.protocol_import.base.ProtImportFiles, tomo.protocols.protocol_base.ProtTomoBase

class tomo.protocols.protocol_base.ProtTomoPicking(**kwargs)[source]

Bases: pwem.protocols.protocol_import.base.ProtImport, tomo.protocols.protocol_base.ProtTomoBase

OUTPUT_PREFIX = 'output3DCoordinates'

Base class for Tomogram boxing protocols.

class tomo.protocols.protocol_base.ProtTomoSubtomogramAveraging(**kwargs)[source]

Bases: pwem.protocols.protocol.EMProtocol, tomo.protocols.protocol_base.ProtTomoBase

Base class for subtomogram averaging protocols.