relion.wizards module

class relion.wizards.Relion2AutopickParams[source]

Bases: pwem.wizards.wizard.EmWizard

show(form)[source]

This will show up the wizard to select parameters. Params:

form: the protocol form, given access to to all parameters.
Some times the same wizard will modifify several elements in the form.
*params: a list of params to modify, sometimes the wizard can
be generic and can be used for different parameters in the same form.
class relion.wizards.Relion2PartDiameter[source]

Bases: relion.wizards.RelionPartMaskDiameterWizard

show(form, *args)[source]

This will show up the wizard to select parameters. Params:

form: the protocol form, given access to to all parameters.
Some times the same wizard will modifify several elements in the form.
*params: a list of params to modify, sometimes the wizard can
be generic and can be used for different parameters in the same form.
class relion.wizards.RelionBackRadiusWizard[source]

Bases: pwem.wizards.wizard.ParticleMaskRadiusWizard

show(form, *args)[source]

This will show up the wizard to select parameters. Params:

form: the protocol form, given access to to all parameters.
Some times the same wizard will modifify several elements in the form.
*params: a list of params to modify, sometimes the wizard can
be generic and can be used for different parameters in the same form.
class relion.wizards.RelionColorScaleWizard[source]

Bases: pwem.wizards.wizard.ColorScaleWizardBase

class relion.wizards.RelionPartMaskDiameterWizard[source]

Bases: relion.wizards.RelionBackRadiusWizard

setVar(form, label, value)[source]
class relion.wizards.RelionSortMaskWizard[source]

Bases: relion.wizards.RelionPartMaskDiameterWizard

class relion.wizards.RelionVolFilterWizard[source]

Bases: pwem.wizards.wizard.FilterVolumesWizard

show(form)[source]

This will show up the wizard to select parameters. Params:

form: the protocol form, given access to to all parameters.
Some times the same wizard will modifify several elements in the form.
*params: a list of params to modify, sometimes the wizard can
be generic and can be used for different parameters in the same form.
class relion.wizards.RelionWizCtfGroupsDisplay[source]

Bases: pwem.wizards.wizard.EmWizard

Simple wizard distribution of defocus groups.

show(form, *args)[source]

This will show up the wizard to select parameters. Params:

form: the protocol form, given access to to all parameters.
Some times the same wizard will modifify several elements in the form.
*params: a list of params to modify, sometimes the wizard can
be generic and can be used for different parameters in the same form.
class relion.wizards.RelionWizLogPickParams[source]

Bases: pwem.wizards.wizard.EmWizard

params = ['minDiameter', 'maxDiameter', 'threshold', 'threshold2']
show(form)[source]

This will show up the wizard to select parameters. Params:

form: the protocol form, given access to to all parameters.
Some times the same wizard will modifify several elements in the form.
*params: a list of params to modify, sometimes the wizard can
be generic and can be used for different parameters in the same form.
class relion.wizards.RelionWizMtfSelector[source]

Bases: pwem.wizards.wizard.EmWizard

Simple wizard to select MTF from some of the predefined ones.

show(form, *args)[source]

This will show up the wizard to select parameters. Params:

form: the protocol form, given access to to all parameters.
Some times the same wizard will modifify several elements in the form.
*params: a list of params to modify, sometimes the wizard can
be generic and can be used for different parameters in the same form.